nsv6632774
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:115,424
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 526 SVs from 68 studies. See in: genome view
Overlapping variant regions from other studies: 526 SVs from 68 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6632774 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 17,061,577 | 17,177,000 |
| nsv6632774 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 16,919,086 | 17,034,509 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18289479 | duplication | OSC3485 | SNP array | Probe signal intensity | 13 |
| nssv18319837 | duplication | OSC0922 | SNP array | Probe signal intensity | nssv18320472, nssv18319832, nssv18319827 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18289479 | Remapped | Perfect | NC_000008.11:g.(?_ 17061577)_(1717700 0_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 17,061,577 | 17,177,000 |
| nssv18319837 | Remapped | Perfect | NC_000008.11:g.(?_ 17061577)_(1717700 0_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 17,061,577 | 17,177,000 |
| nssv18289479 | Submitted genomic | NC_000008.10:g.(?_ 16919086)_(1703450 9_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 16,919,086 | 17,034,509 | ||
| nssv18319837 | Submitted genomic | NC_000008.10:g.(?_ 16919086)_(1703450 9_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 16,919,086 | 17,034,509 |