nsv6633553
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:10
- Validation:Not tested
- Clinical Assertions: No
- Region Size:19,302
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 510 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 514 SVs from 59 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6633553 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nsv6633553 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18281675 | deletion | OSC2076 | SNP array | Probe signal intensity | 5 |
| nssv18281840 | deletion | OSC2192 | SNP array | Probe signal intensity | 8 |
| nssv18282067 | deletion | OSC2135 | SNP array | Probe signal intensity | 5 |
| nssv18285749 | deletion | OSC2839 | SNP array | Probe signal intensity | 8 |
| nssv18287351 | deletion | OSC3066 | SNP array | Probe signal intensity | 6 |
| nssv18290725 | deletion | OSC3718 | SNP array | Probe signal intensity | 7 |
| nssv18292537 | deletion | OSC3885 | SNP array | Probe signal intensity | 6 |
| nssv18293427 | deletion | OSC4078 | SNP array | Probe signal intensity | 6 |
| nssv18322528 | deletion | OSC0156 | SNP array | Probe signal intensity | 5 |
| nssv18324164 | deletion | OSC1564 | SNP array | Probe signal intensity | 8 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18281675 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18281840 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18282067 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18285749 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18287351 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18290725 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18292537 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18293427 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18322528 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18324164 | Remapped | Perfect | NC_000009.12:g.(?_ 9798092)_(9817393_ ?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 9,798,092 | 9,817,393 |
| nssv18281675 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18281840 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18282067 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18285749 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18287351 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18290725 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18292537 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18293427 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18322528 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 | ||
| nssv18324164 | Submitted genomic | NC_000009.11:g.(?_ 9798092)_(9817393_ ?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 9,798,092 | 9,817,393 |