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dbVar

Database of genomic structural variation

nsv6633954

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:35,652

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 467 SVs from 51 studies. See in: genome view

Remapped(Score: Good):104,004,450-104,040,101

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6633954	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nsv6633954	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	103,259,022	103,294,668

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18281648	duplication	OSC2050	SNP array	Probe signal intensity	5
nssv18284407	duplication	OSC2532	SNP array	Probe signal intensity	6
nssv18287220	duplication	OSC2978	SNP array	Probe signal intensity	6
nssv18288928	duplication	OSC3299	SNP array	Probe signal intensity	13
nssv18288931	duplication	OSC3302	SNP array	Probe signal intensity	5
nssv18290971	duplication	OSC3644	SNP array	Probe signal intensity	7
nssv18296421	duplication	OSC0045	SNP array	Probe signal intensity	7
nssv18320779	duplication	OSC0925	SNP array	Probe signal intensity	13
nssv18323995	duplication	OSC1640	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18281648	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18284407	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18287220	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18288928	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18288931	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18290971	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18296421	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18320779	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18323995	Remapped	Good	NC_000023.11:g.(?_ 104004450)_(104040 101_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	104,004,450	104,040,101
nssv18281648	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668
nssv18284407	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668
nssv18287220	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668
nssv18288928	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668
nssv18288931	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668
nssv18290971	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668
nssv18296421	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668
nssv18320779	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668
nssv18323995	Submitted genomic		NC_000023.10:g.(?_ 103259022)_(103294 668_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	103,259,022	103,294,668

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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