nsv6636044
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:196,733
- Description:Single allele AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 691 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 691 SVs from 65 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv6636044 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 32,823,397 | 32,844,773 | 32,849,845 | 33,020,129 |
nsv6636044 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 32,841,514 | 32,862,890 | 32,867,962 | 33,038,246 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv18329043 | duplication | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV002475205.1, VCV001807248.1 |
nssv18329045 | deletion | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV002475207.1, VCV001807250.1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv18329043 | Remapped | Perfect | NC_000023.11:g.(32 823397_32844773)_( 32849845_33020129) dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 32,823,397 | 32,844,773 | 32,849,845 | 33,020,129 |
nssv18329045 | Remapped | Perfect | NC_000023.11:g.(32 823397_32844773)_( 32849845_33020129) del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 32,823,397 | 32,844,773 | 32,849,845 | 33,020,129 |
nssv18329043 | Submitted genomic | NC_000023.10:g.(32 841514_32862890)_( 32867962_33038246) dup | GRCh37 (hg19) | NC_000023.10 | ChrX | 32,841,514 | 32,862,890 | 32,867,962 | 33,038,246 | ||
nssv18329045 | Submitted genomic | NC_000023.10:g.(32 841514_32862890)_( 32867962_33038246) del | GRCh37 (hg19) | NC_000023.10 | ChrX | 32,841,514 | 32,862,890 | 32,867,962 | 33,038,246 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv18329043 | GRCh37: NC_000023.10:g.(32841514_32862890)_(32867962_33038246)dup | duplication | unknown | not provided | Pathogenic | ClinVar | RCV002475205.1, VCV001807248.1 |
nssv18329045 | GRCh37: NC_000023.10:g.(32841514_32862890)_(32867962_33038246)del | deletion | unknown | not provided | Pathogenic | ClinVar | RCV002475207.1, VCV001807250.1 |