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dbVar

Database of genomic structural variation

nsv6638038

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:233,517

Description:GRCh37/hg19 16q24.3(chr16:89662422-89895938)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1787 SVs from 86 studies. See in: genome view

Remapped(Score: Perfect):89,596,014-89,829,530

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6638038	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	89,596,014	89,829,530
nsv6638038	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	89,662,422	89,895,938

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv18330886	copy number loss	Multiple	Multiple	not provided	Uncertain significance	ClinVar	RCV002472747.1, VCV001807941.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18330886	Remapped	Perfect	NC_000016.10:g.(?_ 89596014)_(8982953 0_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	89,596,014	89,829,530
nssv18330886	Submitted genomic		NC_000016.9:g.(?_8 9662422)_(89895938 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	89,662,422	89,895,938

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv18330886	GRCh37: NC_000016.9:g.(?_89662422)_(89895938_?)del	copy number loss	unknown	not provided	Uncertain significance	ClinVar	RCV002472747.1, VCV001807941.1	1

No genotype data were submitted for this variant

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