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dbVar

Database of genomic structural variation

nsv6889515

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:97

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 70 SVs from 21 studies. See in: genome view

Submitted genomic15,263,860-15,263,956

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6889515	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000010.11	Chr10	15,263,860	15,263,956
nsv6889515	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	15,305,859	15,305,955

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18333855	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18333855	Submitted genomic		NC_000010.11:g.152 63860_15263956del	GRCh38 (hg38)		NC_000010.11	Chr10	15,263,860	15,263,956
nssv18333855	Remapped	Perfect	NC_000010.10:g.153 05859_15305955del	GRCh37.p13	First Pass	NC_000010.10	Chr10	15,305,859	15,305,955

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18333855	0.002	269	196746

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