nsv7057058
- Organism: Homo sapiens
- Study:nstd229 (Jun et al. 2023)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:3,812,109
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 11108 SVs from 121 studies. See in: genome view
Overlapping variant regions from other studies: 11108 SVs from 121 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv7057058 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000004.12 | Chr4 | 165,065,528 | 168,877,636 | ||
nsv7057058 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 165,986,680 | 169,798,787 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv18773144 | inversion | Sequencing | Split read and paired-end mapping |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv18773144 | Submitted genomic | NC_000004.12:g.165 065528_168877636in v | GRCh38 (hg38) | NC_000004.12 | Chr4 | 165,065,528 | 168,877,636 | ||
nssv18773144 | Remapped | Perfect | NC_000004.11:g.165 986680_169798787in v | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,986,680 | 169,798,787 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv18773144 | 4e-06 | 1 | 276268 |