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dbVar

Database of genomic structural variation

nsv7097046

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:1,885,162

Description:NC_000006.11:g.(?_142623467)_(144508628_?)del AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 3767 SVs from 90 studies. See in: genome view

Remapped(Score: Perfect):142,302,330-144,187,491

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv7097046	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	142,302,330	144,187,491
nsv7097046	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	142,623,467	144,508,628

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID
nssv18789648	deletion	Multiple	Multiple	not provided	Pathogenic	ClinVar	RCV003113292.2, VCV002424710.2

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18789648	Remapped	Perfect	NC_000006.12:g.(?_ 142302330)_(144187 491_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	142,302,330	144,187,491
nssv18789648	Submitted genomic		NC_000006.11:g.(?_ 142623467)_(144508 628_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	142,623,467	144,508,628

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID
nssv18789648	GRCh37: NC_000006.11:g.(?_142623467)_(144508628_?)del	deletion	germline	not provided	Pathogenic	ClinVar	RCV003113292.2, VCV002424710.2

No genotype data were submitted for this variant

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