nsv75
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:32,157
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 617 SVs from 66 studies. See in: genome view
Overlapping variant regions from other studies: 617 SVs from 66 studies. See in: genome view
Overlapping variant regions from other studies: 17 SVs from 9 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv75 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 107,348,898 | 107,381,054 |
| nsv75 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 107,219,624 | 107,251,780 |
| nsv75 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000011.8 | Chr11 | 106,724,834 | 106,756,990 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv75 | deletion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv75 | Remapped | Perfect | NC_000011.10:g.(10 7348898_?)_(?_1073 81054)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 107,348,898 | 107,381,054 |
| nssv75 | Remapped | Perfect | NC_000011.9:g.(107 219624_?)_(?_10725 1780)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 107,219,624 | 107,251,780 |
| nssv75 | Submitted genomic | NC_000011.8:g.(106 724834_?)_(?_10675 6990)del10634 | NCBI35 (hg17) | NC_000011.8 | Chr11 | 106,724,834 | 106,756,990 |