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dbVar

Database of genomic structural variation

nsv760

Organism: Homo sapiens

Study:nstd2 (Kidd et al. 2008)
Variant Type:insertion
Method Type:Sequencing
Submitted on:NCBI35 (hg17)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:54,748

Publication(s):Kidd et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 280 SVs from 52 studies. See in: genome view

Remapped(Score: Perfect):69,003,771-69,058,518

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv760	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	69,003,771	69,058,518
nsv760	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000012.11	Chr12	69,397,551	69,452,298
nsv760	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000012.9	Chr12	67,683,818	67,738,565

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv5433	insertion	NA19129	Sequencing	Paired-end mapping	1,384
nssv4031	insertion	NA12878	Sequencing	Paired-end mapping	1,451

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv5433	Remapped	Perfect	NC_000012.12:g.(69 003771_?)_(?_69037 181)ins5854	GRCh38.p12	First Pass	NC_000012.12	Chr12	69,003,771	69,037,181
nssv4031	Remapped	Perfect	NC_000012.12:g.(69 025959_?)_(?_69058 518)ins7178	GRCh38.p12	First Pass	NC_000012.12	Chr12	69,025,959	69,058,518
nssv5433	Remapped	Perfect	NC_000012.11:g.(69 397551_?)_(?_69430 961)ins5854	GRCh37.p13	First Pass	NC_000012.11	Chr12	69,397,551	69,430,961
nssv4031	Remapped	Perfect	NC_000012.11:g.(69 419739_?)_(?_69452 298)ins7178	GRCh37.p13	First Pass	NC_000012.11	Chr12	69,419,739	69,452,298
nssv5433	Submitted genomic		NC_000012.9:g.(676 83818_?)_(?_677172 28)ins5854	NCBI35 (hg17)		NC_000012.9	Chr12	67,683,818	67,717,228
nssv4031	Submitted genomic		NC_000012.9:g.(677 06006_?)_(?_677385 65)ins7178	NCBI35 (hg17)		NC_000012.9	Chr12	67,706,006	67,738,565

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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