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dbVar

Database of genomic structural variation

nsv7719

Organism: Homo sapiens

Study:nstd2 (Kidd et al. 2008)
Variant Type:insertion
Method Type:Sequencing
Submitted on:NCBI35 (hg17)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:53,517

Publication(s):Kidd et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 234 SVs from 56 studies. See in: genome view

Remapped(Score: Perfect):26,146,514-26,200,030

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv7719	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	26,146,514	26,200,030
nsv7719	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	26,168,061	26,221,577
nsv7719	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000011.8	Chr11	26,124,637	26,178,153

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv10811	insertion	NA18956	Sequencing	Paired-end mapping	905
nssv2860	insertion	NA18555	Sequencing	Paired-end mapping	1,472

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv10811	Remapped	Perfect	NC_000011.10:g.(26 146514_?)_(?_26178 526)ins7497	GRCh38.p12	First Pass	NC_000011.10	Chr11	26,146,514	26,178,526
nssv2860	Remapped	Perfect	NC_000011.10:g.(26 165983_?)_(?_26200 030)ins5982	GRCh38.p12	First Pass	NC_000011.10	Chr11	26,165,983	26,200,030
nssv10811	Remapped	Perfect	NC_000011.9:g.(261 68061_?)_(?_262000 73)ins7497	GRCh37.p13	First Pass	NC_000011.9	Chr11	26,168,061	26,200,073
nssv2860	Remapped	Perfect	NC_000011.9:g.(261 87530_?)_(?_262215 77)ins5982	GRCh37.p13	First Pass	NC_000011.9	Chr11	26,187,530	26,221,577
nssv10811	Submitted genomic		NC_000011.8:g.(261 24637_?)_(?_261566 49)ins7497	NCBI35 (hg17)		NC_000011.8	Chr11	26,124,637	26,156,649
nssv2860	Submitted genomic		NC_000011.8:g.(261 44106_?)_(?_261781 53)ins5982	NCBI35 (hg17)		NC_000011.8	Chr11	26,144,106	26,178,153

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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