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dbVar

Database of genomic structural variation

nsv818658

Organism: Homo sapiens

Study:nstd64 (Wang et al. 2007)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI35 (hg17)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:163,701

Publication(s):Wang et al. 2007

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1310 SVs from 93 studies. See in: genome view

Remapped(Score: Perfect):136,675,712-136,839,412

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv818658	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	136,675,712	136,839,412
nsv818658	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	137,687,955	137,851,655
nsv818658	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000008.9	Chr8	137,757,137	137,920,837

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1415671	copy number loss	NA12249	SNP array	Probe signal intensity	20
nssv1415674	copy number loss	NA10835	SNP array	Probe signal intensity	30
nssv1415770	copy number loss	NA12874	SNP array	Probe signal intensity	16
nssv1416255	copy number loss	NA12056	SNP array	Probe signal intensity	26
nssv1418010	copy number loss	NA07357	SNP array	Probe signal intensity	30

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv1415671	Remapped	Perfect	NC_000008.11:g.(?_ 136675712)_(136839 412_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,675,712	136,839,412
nssv1415674	Remapped	Perfect	NC_000008.11:g.(?_ 136675712)_(136839 412_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,675,712	136,839,412
nssv1415770	Remapped	Perfect	NC_000008.11:g.(?_ 136675712)_(136839 412_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,675,712	136,839,412
nssv1416255	Remapped	Perfect	NC_000008.11:g.(?_ 136675712)_(136839 412_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,675,712	136,839,412
nssv1418010	Remapped	Perfect	NC_000008.11:g.(?_ 136675712)_(136839 412_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,675,712	136,839,412
nssv1415671	Remapped	Perfect	NC_000008.10:g.(?_ 137687955)_(137851 655_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	137,687,955	137,851,655
nssv1415674	Remapped	Perfect	NC_000008.10:g.(?_ 137687955)_(137851 655_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	137,687,955	137,851,655
nssv1415770	Remapped	Perfect	NC_000008.10:g.(?_ 137687955)_(137851 655_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	137,687,955	137,851,655
nssv1416255	Remapped	Perfect	NC_000008.10:g.(?_ 137687955)_(137851 655_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	137,687,955	137,851,655
nssv1418010	Remapped	Perfect	NC_000008.10:g.(?_ 137687955)_(137851 655_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	137,687,955	137,851,655
nssv1415671	Submitted genomic		NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del	NCBI35 (hg17)		NC_000008.9	Chr8	137,757,137	137,920,837
nssv1415674	Submitted genomic		NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del	NCBI35 (hg17)		NC_000008.9	Chr8	137,757,137	137,920,837
nssv1415770	Submitted genomic		NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del	NCBI35 (hg17)		NC_000008.9	Chr8	137,757,137	137,920,837
nssv1416255	Submitted genomic		NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del	NCBI35 (hg17)		NC_000008.9	Chr8	137,757,137	137,920,837
nssv1418010	Submitted genomic		NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del	NCBI35 (hg17)		NC_000008.9	Chr8	137,757,137	137,920,837

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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