nsv819285
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:304
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 311 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 311 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 177 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv819285 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 6,868,638 | 6,868,941 |
| nsv819285 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 6,868,751 | 6,869,054 |
| nsv819285 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000005.8 | Chr5 | 6,921,751 | 6,922,054 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418889 | insertion | SAMN00002681 | Sequencing | Paired-end mapping | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418889 | Remapped | Perfect | NC_000005.10:g.(68 68638_?)_(?_686894 1)ins1353 | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 6,868,638 | 6,868,941 |
| nssv1418889 | Remapped | Perfect | NC_000005.9:g.(686 8751_?)_(?_6869054 )ins1353 | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 6,868,751 | 6,869,054 |
| nssv1418889 | Submitted genomic | NC_000005.8:g.(692 1751_?)_(?_6922054 )ins1353 | NCBI36 (hg18) | NC_000005.8 | Chr5 | 6,921,751 | 6,922,054 |