nsv819520
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:46,429
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 312 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 312 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 78 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv819520 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 75,527,112 | 75,573,540 |
| nsv819520 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 75,819,453 | 75,865,881 |
| nsv819520 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 73,606,508 | 73,652,936 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418742 | copy number loss | SAMN00002681 | Oligo aCGH | Probe signal intensity | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418742 | Remapped | Perfect | NC_000015.10:g.(?_ 75527112)_(7557354 0_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 75,527,112 | 75,573,540 |
| nssv1418742 | Remapped | Perfect | NC_000015.9:g.(?_7 5819453)_(75865881 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 75,819,453 | 75,865,881 |
| nssv1418742 | Submitted genomic | NC_000015.8:g.(?_7 3606508)_(73652936 _?)del | NCBI36 (hg18) | NC_000015.8 | Chr15 | 73,606,508 | 73,652,936 |