nsv819768
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:32,058
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 365 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 368 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 137 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv819768 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 69,480,126 | 69,512,183 |
| nsv819768 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 72,095,042 | 72,127,099 |
| nsv819768 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 71,284,862 | 71,316,919 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418719 | copy number loss | SAMN00002681 | Oligo aCGH | Probe signal intensity | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418719 | Remapped | Perfect | NC_000009.12:g.(?_ 69480126)_(6951218 3_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 69,480,126 | 69,512,183 |
| nssv1418719 | Remapped | Perfect | NC_000009.11:g.(?_ 72095042)_(7212709 9_?)del | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 72,095,042 | 72,127,099 |
| nssv1418719 | Submitted genomic | NC_000009.10:g.(?_ 71284862)_(7131691 9_?)del | NCBI36 (hg18) | NC_000009.10 | Chr9 | 71,284,862 | 71,316,919 |