nsv819920
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:43,516
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 237 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 237 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 82 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv819920 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 110,658,562 | 110,702,077 |
| nsv819920 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 109,994,263 | 110,037,778 |
| nsv819920 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000005.8 | Chr5 | 110,022,162 | 110,065,677 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418735 | copy number gain | SAMN00002681 | Oligo aCGH | Probe signal intensity | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418735 | Remapped | Perfect | NC_000005.10:g.(?_ 110658562)_(110702 077_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 110,658,562 | 110,702,077 |
| nssv1418735 | Remapped | Perfect | NC_000005.9:g.(?_1 09994263)_(1100377 78_?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 109,994,263 | 110,037,778 |
| nssv1418735 | Submitted genomic | NC_000005.8:g.(?_1 10022162)_(1100656 77_?)dup | NCBI36 (hg18) | NC_000005.8 | Chr5 | 110,022,162 | 110,065,677 |