nsv820021
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:16,905
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 584 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 584 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 293 SVs from 30 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv820021 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 134,098,877 | 134,115,781 |
| nsv820021 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 133,783,630 | 133,800,534 |
| nsv820021 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 133,434,170 | 133,451,074 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418665 | copy number gain | SAMN00002681 | Oligo aCGH | Probe signal intensity | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418665 | Remapped | Perfect | NC_000007.14:g.(?_ 134098877)_(134115 781_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 134,098,877 | 134,115,781 |
| nssv1418665 | Remapped | Perfect | NC_000007.13:g.(?_ 133783630)_(133800 534_?)dup | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 133,783,630 | 133,800,534 |
| nssv1418665 | Submitted genomic | NC_000007.12:g.(?_ 133434170)_(133451 074_?)dup | NCBI36 (hg18) | NC_000007.12 | Chr7 | 133,434,170 | 133,451,074 |