nsv820025
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:46
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 129 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 129 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 36 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv820025 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 14,596,025 | 14,596,070 |
| nsv820025 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000019.9 | Chr19 | 14,706,837 | 14,706,882 |
| nsv820025 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000019.8 | Chr19 | 14,567,837 | 14,567,882 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418900 | insertion | SAMN00002681 | Sequencing | Paired-end mapping | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418900 | Remapped | Perfect | NC_000019.10:g.(14 596025_?)_(?_14596 070)ins1357 | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 14,596,025 | 14,596,070 |
| nssv1418900 | Remapped | Perfect | NC_000019.9:g.(147 06837_?)_(?_147068 82)ins1357 | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 14,706,837 | 14,706,882 |
| nssv1418900 | Submitted genomic | NC_000019.8:g.(145 67837_?)_(?_145678 82)ins1357 | NCBI36 (hg18) | NC_000019.8 | Chr19 | 14,567,837 | 14,567,882 |