nsv820084
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:220
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 411 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 411 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 259 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv820084 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000021.9 | Chr21 | 45,340,239 | 45,340,458 |
| nsv820084 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000021.8 | Chr21 | 46,760,154 | 46,760,373 |
| nsv820084 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000021.7 | Chr21 | 45,584,582 | 45,584,801 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418907 | insertion | SAMN00002681 | Sequencing | Paired-end mapping | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418907 | Remapped | Perfect | NC_000021.9:g.(453 40239_?)_(?_453404 58)ins938 | GRCh38.p12 | First Pass | NC_000021.9 | Chr21 | 45,340,239 | 45,340,458 |
| nssv1418907 | Remapped | Perfect | NC_000021.8:g.(467 60154_?)_(?_467603 73)ins938 | GRCh37.p13 | First Pass | NC_000021.8 | Chr21 | 46,760,154 | 46,760,373 |
| nssv1418907 | Submitted genomic | NC_000021.7:g.(455 84582_?)_(?_455848 01)ins938 | NCBI36 (hg18) | NC_000021.7 | Chr21 | 45,584,582 | 45,584,801 |