nsv820212
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:60,801
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 852 SVs from 77 studies. See in: genome view
Overlapping variant regions from other studies: 860 SVs from 77 studies. See in: genome view
Overlapping variant regions from other studies: 316 SVs from 23 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv820212 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 87,340,063 | 87,400,863 |
| nsv820212 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 87,567,186 | 87,627,986 |
| nsv820212 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000002.10 | Chr2 | 87,420,697 | 87,481,497 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418910 | insertion | SAMN00002681 | Sequencing | Paired-end mapping | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418910 | Remapped | Perfect | NC_000002.12:g.(87 340063_?)_(?_87400 863)ins? | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 87,340,063 | 87,400,863 |
| nssv1418910 | Remapped | Perfect | NC_000002.11:g.(87 567186_?)_(?_87627 986)ins? | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 87,567,186 | 87,627,986 |
| nssv1418910 | Submitted genomic | NC_000002.10:g.(87 420697_?)_(?_87481 497)ins(0_?) | NCBI36 (hg18) | NC_000002.10 | Chr2 | 87,420,697 | 87,481,497 |