nsv820259
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:97
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 125 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 125 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 29 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv820259 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 22,577,906 | 22,578,002 |
| nsv820259 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 22,904,399 | 22,904,495 |
| nsv820259 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000001.9 | Chr1 | 22,776,986 | 22,777,082 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418885 | insertion | SAMN00002681 | Sequencing | Paired-end mapping | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418885 | Remapped | Perfect | NC_000001.11:g.(22 577906_?)_(?_22578 002)ins1377 | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 22,577,906 | 22,578,002 |
| nssv1418885 | Remapped | Perfect | NC_000001.10:g.(22 904399_?)_(?_22904 495)ins1377 | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 22,904,399 | 22,904,495 |
| nssv1418885 | Submitted genomic | NC_000001.9:g.(227 76986_?)_(?_227770 82)ins1377 | NCBI36 (hg18) | NC_000001.9 | Chr1 | 22,776,986 | 22,777,082 |