nsv821041
- Organism: Homo sapiens
- Study:nstd65 (Ju et al. 2010)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:45,722
- Publication(s):Ju et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 500 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 225 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 241 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 210 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv821041 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 43,334 | 85,201 |
| nsv821041 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NW_003571049.1 | Chr12|NW_0 03571049.1 | 33,495 | 79,216 |
| nsv821041 | Remapped | Pass | GRCh37.p13 | PATCHES | First Pass | NW_003571048.1 | Chr12|NW_0 03571048.1 | 35,740 | 75,201 |
| nsv821041 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000012.10 | Chr12 | 17,370 | 64,628 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1420972 | Remapped | Good | NW_003571049.1:g.( ?_33495)_(79216_?) dup | GRCh38.p12 | Second Pass | NW_003571049.1 | Chr12|NW_0 03571049.1 | 33,495 | 79,216 |
| nssv1420972 | Remapped | Pass | NC_000012.12:g.(?_ 43334)_(85201_?)du p | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 43,334 | 85,201 |
| nssv1420972 | Remapped | Pass | NW_003571048.1:g.( ?_35740)_(75201_?) dup | GRCh37.p13 | First Pass | NW_003571048.1 | Chr12|NW_0 03571048.1 | 35,740 | 75,201 |
| nssv1420972 | Submitted genomic | NC_000012.10:g.(?_ 17370)_(64628_?)du p | NCBI36 (hg18) | NC_000012.10 | Chr12 | 17,370 | 64,628 |