nsv821490
- Organism: Homo sapiens
- Study:nstd65 (Ju et al. 2010)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:49,270
- Publication(s):Ju et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 858 SVs from 86 studies. See in: genome view
Overlapping variant regions from other studies: 687 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 858 SVs from 86 studies. See in: genome view
Overlapping variant regions from other studies: 496 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 499 SVs from 30 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv821490 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 34,777,918 | 34,827,187 |
nsv821490 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NW_003315915.1 | Chr4|NW_00 3315915.1 | 270,247 | 319,516 |
nsv821490 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 34,779,540 | 34,828,809 |
nsv821490 | Remapped | Perfect | GRCh37.p13 | PATCHES | Second Pass | NW_003315915.1 | Chr4|NW_00 3315915.1 | 270,247 | 319,516 |
nsv821490 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 34,455,935 | 34,505,204 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv1420408 | Remapped | Perfect | NW_003315915.1:g.( ?_270247)_(319516_ ?)del | GRCh38.p12 | Second Pass | NW_003315915.1 | Chr4|NW_00 3315915.1 | 270,247 | 319,516 |
nssv1420408 | Remapped | Perfect | NC_000004.12:g.(?_ 34777918)_(3482718 7_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 34,777,918 | 34,827,187 |
nssv1420408 | Remapped | Perfect | NW_003315915.1:g.( ?_270247)_(319516_ ?)del | GRCh37.p13 | Second Pass | NW_003315915.1 | Chr4|NW_00 3315915.1 | 270,247 | 319,516 |
nssv1420408 | Remapped | Perfect | NC_000004.11:g.(?_ 34779540)_(3482880 9_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 34,779,540 | 34,828,809 |
nssv1420408 | Submitted genomic | NC_000004.10:g.(?_ 34455935)_(3450520 4_?)del | NCBI36 (hg18) | NC_000004.10 | Chr4 | 34,455,935 | 34,505,204 |