nsv821656
- Organism: Homo sapiens
- Study:nstd66 (Sebat et al. 2004)
- Variant Type:copy number variation
- Method Type:ROMA
- Submitted on:NCBI35 (hg17)
- Variant Calls:8
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,290,422
- Publication(s):Sebat et al. 2004
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 6398 SVs from 123 studies. See in: genome view
Overlapping variant regions from other studies: 6398 SVs from 123 studies. See in: genome view
Overlapping variant regions from other studies: 159 SVs from 17 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv821656 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nsv821656 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nsv821656 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv1421204 | copy number gain | ROMA | Probe signal intensity |
nssv1421205 | copy number gain | ROMA | Probe signal intensity |
nssv1421206 | copy number gain | ROMA | Probe signal intensity |
nssv1421207 | copy number gain | ROMA | Probe signal intensity |
nssv1421208 | copy number gain | ROMA | Probe signal intensity |
nssv1421209 | copy number gain | ROMA | Probe signal intensity |
nssv1421210 | copy number gain | ROMA | Probe signal intensity |
nssv1421211 | copy number gain | ROMA | Probe signal intensity |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv1421204 | Remapped | Good | NC_000008.11:g.(?_ 7026684)_(8317105_ ?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nssv1421205 | Remapped | Good | NC_000008.11:g.(?_ 7026684)_(8317105_ ?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nssv1421206 | Remapped | Good | NC_000008.11:g.(?_ 7026684)_(8317105_ ?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nssv1421207 | Remapped | Good | NC_000008.11:g.(?_ 7026684)_(8317105_ ?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nssv1421208 | Remapped | Good | NC_000008.11:g.(?_ 7026684)_(8317105_ ?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nssv1421209 | Remapped | Good | NC_000008.11:g.(?_ 7026684)_(8317105_ ?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nssv1421210 | Remapped | Good | NC_000008.11:g.(?_ 7026684)_(8317105_ ?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nssv1421211 | Remapped | Good | NC_000008.11:g.(?_ 7026684)_(8317105_ ?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 7,026,684 | 8,317,105 |
nssv1421204 | Remapped | Good | NC_000008.10:g.(?_ 6884206)_(8174627_ ?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nssv1421205 | Remapped | Good | NC_000008.10:g.(?_ 6884206)_(8174627_ ?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nssv1421206 | Remapped | Good | NC_000008.10:g.(?_ 6884206)_(8174627_ ?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nssv1421207 | Remapped | Good | NC_000008.10:g.(?_ 6884206)_(8174627_ ?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nssv1421208 | Remapped | Good | NC_000008.10:g.(?_ 6884206)_(8174627_ ?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nssv1421209 | Remapped | Good | NC_000008.10:g.(?_ 6884206)_(8174627_ ?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nssv1421210 | Remapped | Good | NC_000008.10:g.(?_ 6884206)_(8174627_ ?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nssv1421211 | Remapped | Good | NC_000008.10:g.(?_ 6884206)_(8174627_ ?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 6,884,206 | 8,174,627 |
nssv1421204 | Submitted genomic | NC_000008.9:g.(?_6 871616)_(8212037_? )dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 | ||
nssv1421205 | Submitted genomic | NC_000008.9:g.(?_6 871616)_(8212037_? )dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 | ||
nssv1421206 | Submitted genomic | NC_000008.9:g.(?_6 871616)_(8212037_? )dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 | ||
nssv1421207 | Submitted genomic | NC_000008.9:g.(?_6 871616)_(8212037_? )dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 | ||
nssv1421208 | Submitted genomic | NC_000008.9:g.(?_6 871616)_(8212037_? )dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 | ||
nssv1421209 | Submitted genomic | NC_000008.9:g.(?_6 871616)_(8212037_? )dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 | ||
nssv1421210 | Submitted genomic | NC_000008.9:g.(?_6 871616)_(8212037_? )dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 | ||
nssv1421211 | Submitted genomic | NC_000008.9:g.(?_6 871616)_(8212037_? )dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 6,871,616 | 8,212,037 |