nsv821663
- Organism: Homo sapiens
- Study:nstd66 (Sebat et al. 2004)
- Variant Type:copy number variation
- Method Type:ROMA
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,471
- Publication(s):Sebat et al. 2004
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 378 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 233 SVs from 45 studies. See in: genome view
Overlapping variant regions from other studies: 16 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv821663 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 62,921,555 | 62,923,025 |
| nsv821663 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 66,577,379 | 66,578,849 |
| nsv821663 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000009.9 | Chr9 | 64,258,651 | 64,260,121 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1421236 | copy number loss | ROMA | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1421236 | Remapped | Perfect | NC_000009.12:g.(?_ 62921555)_(6292302 5_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 62,921,555 | 62,923,025 |
| nssv1421236 | Remapped | Perfect | NC_000009.11:g.(?_ 66577379)_(6657884 9_?)del | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 66,577,379 | 66,578,849 |
| nssv1421236 | Submitted genomic | NC_000009.9:g.(?_6 4258651)_(64260121 _?)del | NCBI35 (hg17) | NC_000009.9 | Chr9 | 64,258,651 | 64,260,121 |