nsv821672
- Organism: Homo sapiens
- Study:nstd66 (Sebat et al. 2004)
- Variant Type:copy number variation
- Method Type:ROMA
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,030,675
- Publication(s):Sebat et al. 2004
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3159 SVs from 95 studies. See in: genome view
Overlapping variant regions from other studies: 3159 SVs from 95 studies. See in: genome view
Overlapping variant regions from other studies: 99 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv821672 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 64,584,661 | 65,615,335 |
| nsv821672 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000013.10 | Chr13 | 65,158,793 | 66,189,467 |
| nsv821672 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000013.9 | Chr13 | 64,056,794 | 65,087,468 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1421247 | copy number loss | ROMA | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1421247 | Remapped | Perfect | NC_000013.11:g.(?_ 64584661)_(6561533 5_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 64,584,661 | 65,615,335 |
| nssv1421247 | Remapped | Perfect | NC_000013.10:g.(?_ 65158793)_(6618946 7_?)del | GRCh37.p13 | First Pass | NC_000013.10 | Chr13 | 65,158,793 | 66,189,467 |
| nssv1421247 | Submitted genomic | NC_000013.9:g.(?_6 4056794)_(65087468 _?)del | NCBI35 (hg17) | NC_000013.9 | Chr13 | 64,056,794 | 65,087,468 |