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dbVar

Database of genomic structural variation

nsv8299

Organism: Homo sapiens

Study:nstd4 (Perry et al. 2008)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:181,232

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 478 SVs from 31 studies. See in: genome view

Remapped(Score: Perfect):15,913,299-16,094,530

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv8299	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	15,913,299	16,094,530
nsv8299	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	15,770,808	15,952,039
nsv8299	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000008.9	Chr8	15,815,179	15,996,410

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv16205	copy number loss	NA10847	Oligo aCGH	Probe signal intensity	437

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv16205	Remapped	Perfect	NC_000008.11:g.(15 913299_15915848)_( 15984857_16094530) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,913,299	15,915,848	15,984,857	16,094,530
nssv16205	Remapped	Perfect	NC_000008.10:g.(15 770808_15773357)_( 15842366_15952039) del	GRCh37.p13	First Pass	NC_000008.10	Chr8	15,770,808	15,773,357	15,842,366	15,952,039
nssv16205	Submitted genomic		NC_000008.9:g.(158 15179_15817728)_(1 5886737_15996410)d el	NCBI35 (hg17)		NC_000008.9	Chr8	15,815,179	15,817,728	15,886,737	15,996,410

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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