Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv830400

Organism: Homo sapiens

Study:nstd68 (Wong et al. 2006)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:223,871

Publication(s):Wong et al. 2006

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 420 SVs from 51 studies. See in: genome view

Remapped(Score: Perfect):93,179,320-93,403,190

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv830400	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	93,179,320	93,403,190
nsv830400	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	92,515,026	92,738,896
nsv830400	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000005.8	Chr5	92,540,782	92,764,652

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv1444853	copy number gain	BAC aCGH	Probe signal intensity
nssv1444854	copy number gain	BAC aCGH	Probe signal intensity
nssv1444855	copy number gain	BAC aCGH	Probe signal intensity
nssv1444856	copy number gain	BAC aCGH	Probe signal intensity
nssv1444857	copy number gain	BAC aCGH	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv1444853	Remapped	Perfect	NC_000005.10:g.(93 179320_?)_(?_93403 190)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	93,179,320	93,403,190
nssv1444854	Remapped	Perfect	NC_000005.10:g.(93 179320_?)_(?_93403 190)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	93,179,320	93,403,190
nssv1444855	Remapped	Perfect	NC_000005.10:g.(93 179320_?)_(?_93403 190)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	93,179,320	93,403,190
nssv1444856	Remapped	Perfect	NC_000005.10:g.(93 179320_?)_(?_93403 190)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	93,179,320	93,403,190
nssv1444857	Remapped	Perfect	NC_000005.10:g.(93 179320_?)_(?_93403 190)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	93,179,320	93,403,190
nssv1444853	Remapped	Perfect	NC_000005.9:g.(925 15026_?)_(?_927388 96)dup	GRCh37.p13	First Pass	NC_000005.9	Chr5	92,515,026	92,738,896
nssv1444854	Remapped	Perfect	NC_000005.9:g.(925 15026_?)_(?_927388 96)dup	GRCh37.p13	First Pass	NC_000005.9	Chr5	92,515,026	92,738,896
nssv1444855	Remapped	Perfect	NC_000005.9:g.(925 15026_?)_(?_927388 96)dup	GRCh37.p13	First Pass	NC_000005.9	Chr5	92,515,026	92,738,896
nssv1444856	Remapped	Perfect	NC_000005.9:g.(925 15026_?)_(?_927388 96)dup	GRCh37.p13	First Pass	NC_000005.9	Chr5	92,515,026	92,738,896
nssv1444857	Remapped	Perfect	NC_000005.9:g.(925 15026_?)_(?_927388 96)dup	GRCh37.p13	First Pass	NC_000005.9	Chr5	92,515,026	92,738,896
nssv1444853	Submitted genomic		NC_000005.8:g.(925 40782_?)_(?_927646 52)dup	NCBI35 (hg17)		NC_000005.8	Chr5	92,540,782	92,764,652
nssv1444854	Submitted genomic		NC_000005.8:g.(925 40782_?)_(?_927646 52)dup	NCBI35 (hg17)		NC_000005.8	Chr5	92,540,782	92,764,652
nssv1444855	Submitted genomic		NC_000005.8:g.(925 40782_?)_(?_927646 52)dup	NCBI35 (hg17)		NC_000005.8	Chr5	92,540,782	92,764,652
nssv1444856	Submitted genomic		NC_000005.8:g.(925 40782_?)_(?_927646 52)dup	NCBI35 (hg17)		NC_000005.8	Chr5	92,540,782	92,764,652
nssv1444857	Submitted genomic		NC_000005.8:g.(925 40782_?)_(?_927646 52)dup	NCBI35 (hg17)		NC_000005.8	Chr5	92,540,782	92,764,652

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI