nsv830436
- Organism: Homo sapiens
- Study:nstd68 (Wong et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:211,484
- Publication(s):Wong et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 597 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 597 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 44 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv830436 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 105,856,569 | 106,068,052 |
| nsv830436 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 105,192,270 | 105,403,753 |
| nsv830436 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000005.8 | Chr5 | 105,220,169 | 105,431,652 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1444956 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1444956 | Remapped | Perfect | NC_000005.10:g.(10 5856569_?)_(?_1060 68052)del | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 105,856,569 | 106,068,052 |
| nssv1444956 | Remapped | Perfect | NC_000005.9:g.(105 192270_?)_(?_10540 3753)del | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 105,192,270 | 105,403,753 |
| nssv1444956 | Submitted genomic | NC_000005.8:g.(105 220169_?)_(?_10543 1652)del | NCBI35 (hg17) | NC_000005.8 | Chr5 | 105,220,169 | 105,431,652 |