nsv834023
- Organism: Homo sapiens
- Study:nstd68 (Wong et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:219,914
- Publication(s):Wong et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 990 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 990 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 101 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv834023 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 60,942,891 | 61,162,804 |
| nsv834023 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000020.10 | Chr20 | 59,517,947 | 59,737,860 |
| nsv834023 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000020.9 | Chr20 | 58,951,342 | 59,171,255 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1455156 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1455156 | Remapped | Perfect | NC_000020.11:g.(60 942891_?)_(?_61162 804)del | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 60,942,891 | 61,162,804 |
| nssv1455156 | Remapped | Perfect | NC_000020.10:g.(59 517947_?)_(?_59737 860)del | GRCh37.p13 | First Pass | NC_000020.10 | Chr20 | 59,517,947 | 59,737,860 |
| nssv1455156 | Submitted genomic | NC_000020.9:g.(589 51342_?)_(?_591712 55)del | NCBI35 (hg17) | NC_000020.9 | Chr20 | 58,951,342 | 59,171,255 |