Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv8417

Organism: Homo sapiens

Study:nstd4 (Perry et al. 2008)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:316,348

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2333 SVs from 38 studies. See in: genome view

Remapped(Score: Perfect):11,869,288-12,185,635

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv8417	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	11,869,288	12,185,635
nsv8417	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	11,869,288	12,185,635
nsv8417	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000009.9	Chr9	11,859,288	12,175,635

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv21840	copy number loss	NA19221	Oligo aCGH	Probe signal intensity	857

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv21840	Remapped	Perfect	NC_000009.12:g.(11 869288_11870284)_( 12185002_12185635) del	GRCh38.p12	First Pass	NC_000009.12	Chr9	11,869,288	11,870,284	12,185,002	12,185,635
nssv21840	Remapped	Perfect	NC_000009.11:g.(11 869288_11870284)_( 12185002_12185635) del	GRCh37.p13	First Pass	NC_000009.11	Chr9	11,869,288	11,870,284	12,185,002	12,185,635
nssv21840	Submitted genomic		NC_000009.9:g.(118 59288_11860284)_(1 2175002_12175635)d el	NCBI35 (hg17)		NC_000009.9	Chr9	11,859,288	11,860,284	12,175,002	12,175,635

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI