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dbVar

Database of genomic structural variation

nsv8617

Organism: Homo sapiens

Study:nstd4 (Perry et al. 2008)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:61,531

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 89 SVs from 22 studies. See in: genome view

Remapped(Score: Perfect):37,526,873-37,588,403

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv8617	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	37,526,873	37,588,403
nsv8617	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	37,815,801	37,877,331
nsv8617	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000010.8	Chr10	37,855,807	37,917,337

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv21614	copy number loss	NA18517	Oligo aCGH	Probe signal intensity	698
nssv23424	copy number loss	NA19221	Oligo aCGH	Probe signal intensity	857

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv21614	Remapped	Perfect	NC_000010.11:g.(37 526873_37527710)_( 37532750_37588403) del	GRCh38.p12	First Pass	NC_000010.11	Chr10	37,526,873	37,527,710	37,532,750	37,588,403
nssv23424	Remapped	Perfect	NC_000010.11:g.(37 526873_37527710)_( 37532750_37588403) del	GRCh38.p12	First Pass	NC_000010.11	Chr10	37,526,873	37,527,710	37,532,750	37,588,403
nssv21614	Remapped	Perfect	NC_000010.10:g.(37 815801_37816638)_( 37821678_37877331) del	GRCh37.p13	First Pass	NC_000010.10	Chr10	37,815,801	37,816,638	37,821,678	37,877,331
nssv23424	Remapped	Perfect	NC_000010.10:g.(37 815801_37816638)_( 37821678_37877331) del	GRCh37.p13	First Pass	NC_000010.10	Chr10	37,815,801	37,816,638	37,821,678	37,877,331
nssv21614	Submitted genomic		NC_000010.8:g.(378 55807_37856644)_(3 7861684_37917337)d el	NCBI35 (hg17)		NC_000010.8	Chr10	37,855,807	37,856,644	37,861,684	37,917,337
nssv23424	Submitted genomic		NC_000010.8:g.(378 55807_37856644)_(3 7861684_37917337)d el	NCBI35 (hg17)		NC_000010.8	Chr10	37,855,807	37,856,644	37,861,684	37,917,337

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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