nsv869739
- Organism: Homo sapiens
- Study:nstd53 (Tuttelmann et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:203,435
- Publication(s):Tüttelmann et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 844 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 844 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 320 SVs from 24 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv869739 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 38,898,425 | 38,907,150 | 39,094,007 | 39,101,859 |
| nsv869739 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 39,190,626 | 39,199,351 | 39,386,208 | 39,394,060 |
| nsv869739 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 36,977,918 | 36,986,643 | 37,173,500 | 37,181,352 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1496999 | copy number gain | SCOS_13 | Oligo aCGH | Probe signal intensity | 38 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1496999 | Remapped | Perfect | NC_000015.10:g.(38 898425_38907150)_( 39094007_39101859) dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 38,898,425 | 38,907,150 | 39,094,007 | 39,101,859 |
| nssv1496999 | Remapped | Perfect | NC_000015.9:g.(391 90626_39199351)_(3 9386208_39394060)d up | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 39,190,626 | 39,199,351 | 39,386,208 | 39,394,060 |
| nssv1496999 | Submitted genomic | NC_000015.8:g.(369 77918_36986643)_(3 7173500_37181352)d up | NCBI36 (hg18) | NC_000015.8 | Chr15 | 36,977,918 | 36,986,643 | 37,173,500 | 37,181,352 |