nsv869745
- Organism: Homo sapiens
- Study:nstd53 (Tuttelmann et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:138,420
- Publication(s):Tüttelmann et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 374 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 374 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 99 SVs from 17 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv869745 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 91,741,899 | 91,766,432 | 91,864,644 | 91,880,318 |
nsv869745 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 91,475,065 | 91,499,598 | 91,597,810 | 91,613,484 |
nsv869745 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 91,114,713 | 91,139,246 | 91,237,458 | 91,253,132 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv1496870 | copy number loss | OAT_20 | Oligo aCGH | Probe signal intensity | 17 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv1496870 | Remapped | Perfect | NC_000011.10:g.(91 741899_91766432)_( 91864644_91880318) del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 91,741,899 | 91,766,432 | 91,864,644 | 91,880,318 |
nssv1496870 | Remapped | Perfect | NC_000011.9:g.(914 75065_91499598)_(9 1597810_91613484)d el | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 91,475,065 | 91,499,598 | 91,597,810 | 91,613,484 |
nssv1496870 | Submitted genomic | NC_000011.8:g.(911 14713_91139246)_(9 1237458_91253132)d el | NCBI36 (hg18) | NC_000011.8 | Chr11 | 91,114,713 | 91,139,246 | 91,237,458 | 91,253,132 |