nsv870099
- Organism: Homo sapiens
- Study:nstd53 (Tuttelmann et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:134,344
- Publication(s):Tüttelmann et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 362 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 362 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 100 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv870099 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 91,280,793 | 91,318,908 | 91,393,704 | 91,415,136 |
| nsv870099 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 91,990,511 | 92,028,626 | 92,103,422 | 92,124,854 |
| nsv870099 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 92,047,232 | 92,085,347 | 92,160,143 | 92,181,575 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1496408 | copy number loss | CONTROL_82 | Oligo aCGH | Probe signal intensity | 13 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1496408 | Remapped | Perfect | NC_000006.12:g.(91 280793_91318908)_( 91393704_91415136) del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 91,280,793 | 91,318,908 | 91,393,704 | 91,415,136 |
| nssv1496408 | Remapped | Perfect | NC_000006.11:g.(91 990511_92028626)_( 92103422_92124854) del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 91,990,511 | 92,028,626 | 92,103,422 | 92,124,854 |
| nssv1496408 | Submitted genomic | NC_000006.10:g.(92 047232_92085347)_( 92160143_92181575) del | NCBI36 (hg18) | NC_000006.10 | Chr6 | 92,047,232 | 92,085,347 | 92,160,143 | 92,181,575 |