nsv870110
- Organism: Homo sapiens
- Study:nstd53 (Tuttelmann et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:116,946
- Publication(s):Tüttelmann et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 671 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 671 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 255 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv870110 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 8,958,420 | 8,967,811 | 9,069,562 | 9,075,365 |
| nsv870110 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 8,958,418 | 8,967,809 | 9,069,560 | 9,075,363 |
| nsv870110 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000018.8 | Chr18 | 8,948,418 | 8,957,809 | 9,059,560 | 9,065,363 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1496190 | copy number gain | OAT_17 | Oligo aCGH | Probe signal intensity | 27 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1496190 | Remapped | Perfect | NC_000018.10:g.(89 58420_8967811)_(90 69562_9075365)dup | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 8,958,420 | 8,967,811 | 9,069,562 | 9,075,365 |
| nssv1496190 | Remapped | Perfect | NC_000018.9:g.(895 8418_8967809)_(906 9560_9075363)dup | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 8,958,418 | 8,967,809 | 9,069,560 | 9,075,363 |
| nssv1496190 | Submitted genomic | NC_000018.8:g.(894 8418_8957809)_(905 9560_9065363)dup | NCBI36 (hg18) | NC_000018.8 | Chr18 | 8,948,418 | 8,957,809 | 9,059,560 | 9,065,363 |