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nsv882588

  • Variant Calls:27
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:77,774

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 825 SVs from 74 studies. See in: genome view    
Remapped(Score: Perfect):105,134,685-105,212,458Question Mark
Overlapping variant regions from other studies: 825 SVs from 74 studies. See in: genome view    
Remapped(Score: Perfect):104,470,386-104,548,159Question Mark
Overlapping variant regions from other studies: 280 SVs from 23 studies. See in: genome view    
Submitted genomic104,498,285-104,576,058Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv882588RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nsv882588RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nsv882588Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1534562copy number lossMS11669SNP arraySNP genotyping analysis42
nssv1537072copy number lossMS13095SNP arraySNP genotyping analysis158
nssv1537292copy number lossMS13154SNP arraySNP genotyping analysis35
nssv1558473copy number lossMS23290SNP arraySNP genotyping analysis41
nssv1559578copy number lossMS24045SNP arraySNP genotyping analysis10
nssv1561809copy number lossMS25241SNP arraySNP genotyping analysis13
nssv1565871copy number lossIS30532SNP arraySNP genotyping analysis35
nssv1567005copy number lossIS31041SNP arraySNP genotyping analysis83
nssv1567440copy number lossIS31082SNP arraySNP genotyping analysis35
nssv1567590copy number lossIS31123SNP arraySNP genotyping analysis37
nssv1568470copy number lossIS31286SNP arraySNP genotyping analysis23
nssv1568743copy number lossIS31335SNP arraySNP genotyping analysis51
nssv1570041copy number lossIS31768SNP arraySNP genotyping analysis26
nssv1570615copy number lossIS32289SNP arraySNP genotyping analysis27
nssv1573637copy number lossIS33475SNP arraySNP genotyping analysis42
nssv1575919copy number lossIS33839SNP arraySNP genotyping analysis63
nssv1578670copy number lossIS34856SNP arraySNP genotyping analysis41
nssv1579625copy number lossIS35145SNP arraySNP genotyping analysis56
nssv1581079copy number lossIS35498SNP arraySNP genotyping analysis45
nssv1583781copy number lossIS36656SNP arraySNP genotyping analysis62
nssv1584026copy number lossIS36787SNP arraySNP genotyping analysis45
nssv1588039copy number lossIS38148SNP arraySNP genotyping analysis24
nssv1588345copy number lossIS38183SNP arraySNP genotyping analysis24
nssv1589246copy number gainIS38330SNP arraySNP genotyping analysis35
nssv1589936copy number lossIS38431SNP arraySNP genotyping analysis11
nssv1594594copy number lossIS39944SNP arraySNP genotyping analysis49
nssv1598519copy number lossIS41128SNP arraySNP genotyping analysis15

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1534562RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1537072RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1537292RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1558473RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1559578RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1561809RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1565871RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1567005RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1567440RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1567590RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1568470RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1568743RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1570041RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1570615RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1573637RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1575919RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1578670RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1579625RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1581079RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1583781RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1584026RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1588039RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1588345RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1589246RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)dup
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1589936RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1594594RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1598519RemappedPerfectNC_000005.10:g.(10
5134685_105138325)
_(105208204_105212
458)del
GRCh38.p12First PassNC_000005.10Chr5105,134,685105,138,325105,208,204105,212,458
nssv1534562RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1537072RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1537292RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1558473RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1559578RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1561809RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1565871RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1567005RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1567440RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1567590RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1568470RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1568743RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1570041RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1570615RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1573637RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1575919RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1578670RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1579625RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1581079RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1583781RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1584026RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1588039RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1588345RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1589246RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)dup
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1589936RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1594594RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1598519RemappedPerfectNC_000005.9:g.(104
470386_104474026)_
(104543905_1045481
59)del
GRCh37.p13First PassNC_000005.9Chr5104,470,386104,474,026104,543,905104,548,159
nssv1534562Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1537072Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1537292Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1558473Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1559578Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1561809Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1565871Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1567005Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1567440Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1567590Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1568470Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1568743Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1570041Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1570615Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1573637Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1575919Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1578670Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1579625Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1581079Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1583781Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1584026Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1588039Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1588345Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1589246Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)dup
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1589936Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1594594Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058
nssv1598519Submitted genomicNC_000005.8:g.(104
498285_104501925)_
(104571804_1045760
58)del
NCBI36 (hg18)NC_000005.8Chr5104,498,285104,501,925104,571,804104,576,058

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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