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nsv883774

  • Variant Calls:3
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:31,511

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 1736 SVs from 103 studies. See in: genome view    
Remapped(Score: Perfect):29,897,941-29,929,419Question Mark
Overlapping variant regions from other studies: 789 SVs from 40 studies. See in: genome view    
Remapped(Score: Good):1,154,274-1,185,784Question Mark
Overlapping variant regions from other studies: 1736 SVs from 103 studies. See in: genome view    
Remapped(Score: Perfect):29,865,718-29,897,196Question Mark
Overlapping variant regions from other studies: 789 SVs from 40 studies. See in: genome view    
Remapped(Score: Good):1,159,894-1,191,404Question Mark
Overlapping variant regions from other studies: 763 SVs from 31 studies. See in: genome view    
Submitted genomic29,973,697-30,005,175Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv883774RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr629,897,94129,900,27629,928,64429,929,419
nsv883774RemappedGoodGRCh38.p12ALT_REF_LOCI_4Second PassNT_167246.2Chr6|NT_16
7246.2		1,154,2741,154,2741,185,7841,185,784
nsv883774RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr629,865,71829,868,05329,896,42129,897,196
nsv883774RemappedGoodGRCh37.p13ALT_REF_LOCI_4Second PassNT_167246.1Chr6|NT_16
7246.1		1,159,8941,159,8941,191,4041,191,404
nsv883774Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr629,973,69729,976,03230,004,40030,005,175

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1529114copy number lossSP81454SNP arraySNP genotyping analysis17
nssv1558776copy number gainMS23532SNP arraySNP genotyping analysisnssv1558774, nssv1558777, nssv1558775
nssv1595242copy number lossIS40192SNP arraySNP genotyping analysis11

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1529114RemappedGoodNT_167246.2:g.(115
4274_1154274)_(118
5784_1185784)del		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		1,154,2741,154,2741,185,7841,185,784
nssv1558776RemappedGoodNT_167246.2:g.(115
4274_1154274)_(118
5784_1185784)dup		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		1,154,2741,154,2741,185,7841,185,784
nssv1595242RemappedGoodNT_167246.2:g.(115
4274_1154274)_(118
5784_1185784)del		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		1,154,2741,154,2741,185,7841,185,784
nssv1529114RemappedPerfectNC_000006.12:g.(29
897941_29900276)_(
29928644_29929419)
del		GRCh38.p12First PassNC_000006.12Chr629,897,94129,900,27629,928,64429,929,419
nssv1558776RemappedPerfectNC_000006.12:g.(29
897941_29900276)_(
29928644_29929419)
dup		GRCh38.p12First PassNC_000006.12Chr629,897,94129,900,27629,928,64429,929,419
nssv1595242RemappedPerfectNC_000006.12:g.(29
897941_29900276)_(
29928644_29929419)
del		GRCh38.p12First PassNC_000006.12Chr629,897,94129,900,27629,928,64429,929,419
nssv1529114RemappedGoodNT_167246.1:g.(115
9894_1159894)_(119
1404_1191404)delNT
_167246.1:g.(11598
94_1159894)_(11914
04_1191404)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		1,159,8941,159,8941,191,4041,191,404
nssv1558776RemappedGoodNT_167246.1:g.(115
9894_1159894)_(119
1404_1191404)dupNT
_167246.1:g.(11598
94_1159894)_(11914
04_1191404)dup		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		1,159,8941,159,8941,191,4041,191,404
nssv1595242RemappedGoodNT_167246.1:g.(115
9894_1159894)_(119
1404_1191404)delNT
_167246.1:g.(11598
94_1159894)_(11914
04_1191404)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		1,159,8941,159,8941,191,4041,191,404
nssv1529114RemappedPerfectNC_000006.11:g.(29
865718_29868053)_(
29896421_29897196)
del		GRCh37.p13First PassNC_000006.11Chr629,865,71829,868,05329,896,42129,897,196
nssv1558776RemappedPerfectNC_000006.11:g.(29
865718_29868053)_(
29896421_29897196)
dup		GRCh37.p13First PassNC_000006.11Chr629,865,71829,868,05329,896,42129,897,196
nssv1595242RemappedPerfectNC_000006.11:g.(29
865718_29868053)_(
29896421_29897196)
del		GRCh37.p13First PassNC_000006.11Chr629,865,71829,868,05329,896,42129,897,196
nssv1529114Submitted genomicNC_000006.10:g.(29
973697_29976032)_(
30004400_30005175)
del		NCBI36 (hg18)NC_000006.10Chr629,973,69729,976,03230,004,40030,005,175
nssv1558776Submitted genomicNC_000006.10:g.(29
973697_29976032)_(
30004400_30005175)
dup		NCBI36 (hg18)NC_000006.10Chr629,973,69729,976,03230,004,40030,005,175
nssv1595242Submitted genomicNC_000006.10:g.(29
973697_29976032)_(
30004400_30005175)
del		NCBI36 (hg18)NC_000006.10Chr629,973,69729,976,03230,004,40030,005,175

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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