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nsv883997

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:12,814

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 473 SVs from 74 studies. See in: genome view    
Remapped(Score: Perfect):29,956,951-29,969,764Question Mark
Overlapping variant regions from other studies: 123 SVs from 33 studies. See in: genome view    
Remapped(Score: Good):1,217,710-1,230,498Question Mark
Overlapping variant regions from other studies: 93 SVs from 29 studies. See in: genome view    
Remapped(Score: Good):1,301,018-1,313,810Question Mark
Overlapping variant regions from other studies: 473 SVs from 74 studies. See in: genome view    
Remapped(Score: Perfect):29,924,728-29,937,541Question Mark
Overlapping variant regions from other studies: 123 SVs from 33 studies. See in: genome view    
Remapped(Score: Good):1,223,330-1,236,118Question Mark
Overlapping variant regions from other studies: 93 SVs from 29 studies. See in: genome view    
Remapped(Score: Good):1,306,603-1,319,395Question Mark
Overlapping variant regions from other studies: 117 SVs from 24 studies. See in: genome view    
Submitted genomic30,032,707-30,045,520Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv883997RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr629,956,95129,957,00229,969,46529,969,764
nsv883997RemappedGoodGRCh38.p12ALT_REF_LOCI_4Second PassNT_167246.2Chr6|NT_16
7246.2		1,217,7101,217,7101,230,4981,230,498
nsv883997RemappedGoodGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2		1,301,0181,301,0181,313,8101,313,810
nsv883997RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr629,924,72829,924,77929,937,24229,937,541
nsv883997RemappedGoodGRCh37.p13ALT_REF_LOCI_4Second PassNT_167246.1Chr6|NT_16
7246.1		1,223,3301,223,3301,236,1181,236,118
nsv883997RemappedGoodGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1		1,306,6031,306,6031,319,3951,319,395
nsv883997Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr630,032,70730,032,75830,045,22130,045,520

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1545719copy number lossMS16921SNP arraySNP genotyping analysis8
nssv1559222copy number lossMS23789SNP arraySNP genotyping analysis11

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1545719RemappedGoodNT_167246.2:g.(121
7710_1217710)_(123
0498_1230498)del		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		1,217,7101,217,7101,230,4981,230,498
nssv1559222RemappedGoodNT_167246.2:g.(121
7710_1217710)_(123
0498_1230498)del		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		1,217,7101,217,7101,230,4981,230,498
nssv1545719RemappedGoodNT_167247.2:g.(130
1018_1301018)_(131
3810_1313810)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		1,301,0181,301,0181,313,8101,313,810
nssv1559222RemappedGoodNT_167247.2:g.(130
1018_1301018)_(131
3810_1313810)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		1,301,0181,301,0181,313,8101,313,810
nssv1545719RemappedPerfectNC_000006.12:g.(29
956951_29957002)_(
29969465_29969764)
del		GRCh38.p12First PassNC_000006.12Chr629,956,95129,957,00229,969,46529,969,764
nssv1559222RemappedPerfectNC_000006.12:g.(29
956951_29957002)_(
29969465_29969764)
del		GRCh38.p12First PassNC_000006.12Chr629,956,95129,957,00229,969,46529,969,764
nssv1545719RemappedGoodNT_167246.1:g.(122
3330_1223330)_(123
6118_1236118)delNT
_167246.1:g.(12233
30_1223330)_(12361
18_1236118)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		1,223,3301,223,3301,236,1181,236,118
nssv1559222RemappedGoodNT_167246.1:g.(122
3330_1223330)_(123
6118_1236118)delNT
_167246.1:g.(12233
30_1223330)_(12361
18_1236118)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		1,223,3301,223,3301,236,1181,236,118
nssv1545719RemappedGoodNT_167247.1:g.(130
6603_1306603)_(131
9395_1319395)delNT
_167247.1:g.(13066
03_1306603)_(13193
95_1319395)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		1,306,6031,306,6031,319,3951,319,395
nssv1559222RemappedGoodNT_167247.1:g.(130
6603_1306603)_(131
9395_1319395)delNT
_167247.1:g.(13066
03_1306603)_(13193
95_1319395)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		1,306,6031,306,6031,319,3951,319,395
nssv1545719RemappedPerfectNC_000006.11:g.(29
924728_29924779)_(
29937242_29937541)
del		GRCh37.p13First PassNC_000006.11Chr629,924,72829,924,77929,937,24229,937,541
nssv1559222RemappedPerfectNC_000006.11:g.(29
924728_29924779)_(
29937242_29937541)
del		GRCh37.p13First PassNC_000006.11Chr629,924,72829,924,77929,937,24229,937,541
nssv1545719Submitted genomicNC_000006.10:g.(30
032707_30032758)_(
30045221_30045520)
del		NCBI36 (hg18)NC_000006.10Chr630,032,70730,032,75830,045,22130,045,520
nssv1559222Submitted genomicNC_000006.10:g.(30
032707_30032758)_(
30045221_30045520)
del		NCBI36 (hg18)NC_000006.10Chr630,032,70730,032,75830,045,22130,045,520

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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