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nsv885085

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:18,385

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 2300 SVs from 95 studies. See in: genome view    
Remapped(Score: Perfect):32,531,237-32,549,621Question Mark
Overlapping variant regions from other studies: 423 SVs from 24 studies. See in: genome view    
Remapped(Score: Pass):3,858,983-3,869,486Question Mark
Overlapping variant regions from other studies: 434 SVs from 25 studies. See in: genome view    
Remapped(Score: Pass):3,833,381-3,843,883Question Mark
Overlapping variant regions from other studies: 2300 SVs from 95 studies. See in: genome view    
Remapped(Score: Perfect):32,499,014-32,517,398Question Mark
Overlapping variant regions from other studies: 399 SVs from 24 studies. See in: genome view    
Remapped(Score: Pass):3,832,679-3,843,181Question Mark
Overlapping variant regions from other studies: 384 SVs from 23 studies. See in: genome view    
Remapped(Score: Pass):3,864,568-3,875,071Question Mark
Overlapping variant regions from other studies: 813 SVs from 34 studies. See in: genome view    
Remapped(Score: Pass):3,827,971-3,838,799Question Mark
Overlapping variant regions from other studies: 1326 SVs from 32 studies. See in: genome view    
Submitted genomic32,606,992-32,625,376Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv885085RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr632,531,23732,533,09832,548,63032,549,621
nsv885085RemappedPassGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2		-3,858,9833,869,486-
nsv885085RemappedPassGRCh38.p12ALT_REF_LOCI_7Second PassNT_167249.2Chr6|NT_16
7249.2		-3,833,3813,843,883-
nsv885085RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr632,499,01432,500,87532,516,40732,517,398
nsv885085RemappedPassGRCh37.p13ALT_REF_LOCI_7Second PassNT_167249.1Chr6|NT_16
7249.1		-3,832,6793,843,181-
nsv885085RemappedPassGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1		-3,864,5683,875,071-
nsv885085RemappedPassGRCh37.p13ALT_REF_LOCI_4Second PassNT_167246.1Chr6|NT_16
7246.1		-3,827,9713,838,799-
nsv885085Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr632,606,99232,608,85332,624,38532,625,376

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1520460copy number lossSP51079SNP arraySNP genotyping analysis12
nssv1522704copy number lossSP53399SNP arraySNP genotyping analysis13

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1520460RemappedPassNT_167249.2:g.(?_3
833381)_(3843883_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		-3,833,3813,843,883-
nssv1522704RemappedPassNT_167249.2:g.(?_3
833381)_(3843883_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		-3,833,3813,843,883-
nssv1520460RemappedPassNT_167247.2:g.(?_3
858983)_(3869486_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		-3,858,9833,869,486-
nssv1522704RemappedPassNT_167247.2:g.(?_3
858983)_(3869486_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		-3,858,9833,869,486-
nssv1520460RemappedPerfectNC_000006.12:g.(32
531237_32533098)_(
32548630_32549621)
del		GRCh38.p12First PassNC_000006.12Chr632,531,23732,533,09832,548,63032,549,621
nssv1522704RemappedPerfectNC_000006.12:g.(32
531237_32533098)_(
32548630_32549621)
del		GRCh38.p12First PassNC_000006.12Chr632,531,23732,533,09832,548,63032,549,621
nssv1520460RemappedPassNT_167246.1:g.(?_3
827971)_(3838799_?
)delNT_167246.1:g.
(?_3827971)_(38387
99_?)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		-3,827,9713,838,799-
nssv1522704RemappedPassNT_167246.1:g.(?_3
827971)_(3838799_?
)delNT_167246.1:g.
(?_3827971)_(38387
99_?)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		-3,827,9713,838,799-
nssv1520460RemappedPassNT_167249.1:g.(?_3
832679)_(3843181_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		-3,832,6793,843,181-
nssv1522704RemappedPassNT_167249.1:g.(?_3
832679)_(3843181_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		-3,832,6793,843,181-
nssv1520460RemappedPassNT_167247.1:g.(?_3
864568)_(3875071_?
)delNT_167247.1:g.
(?_3864568)_(38750
71_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		-3,864,5683,875,071-
nssv1522704RemappedPassNT_167247.1:g.(?_3
864568)_(3875071_?
)delNT_167247.1:g.
(?_3864568)_(38750
71_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		-3,864,5683,875,071-
nssv1520460RemappedPerfectNC_000006.11:g.(32
499014_32500875)_(
32516407_32517398)
del		GRCh37.p13First PassNC_000006.11Chr632,499,01432,500,87532,516,40732,517,398
nssv1522704RemappedPerfectNC_000006.11:g.(32
499014_32500875)_(
32516407_32517398)
del		GRCh37.p13First PassNC_000006.11Chr632,499,01432,500,87532,516,40732,517,398
nssv1520460Submitted genomicNC_000006.10:g.(32
606992_32608853)_(
32624385_32625376)
del		NCBI36 (hg18)NC_000006.10Chr632,606,99232,608,85332,624,38532,625,376
nssv1522704Submitted genomicNC_000006.10:g.(32
606992_32608853)_(
32624385_32625376)
del		NCBI36 (hg18)NC_000006.10Chr632,606,99232,608,85332,624,38532,625,376

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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