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dbVar

Database of genomic structural variation

nsv885493

Organism: Homo sapiens

Study:nstd71 (Xu et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:17,854

Publication(s):Xu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1872 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):32,580,526-32,598,379

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv885493	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	32,580,526	32,584,248	32,597,007	32,598,379
nsv885493	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	32,548,303	32,552,025	32,564,784	32,566,156
nsv885493	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000006.10	Chr6	32,656,281	32,660,003	32,672,762	32,674,134

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1573362	copy number gain	IS33330	SNP array	SNP genotyping analysis	8
nssv1576380	copy number gain	IS34051	SNP array	SNP genotyping analysis	16

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1573362	Remapped	Perfect	NC_000006.12:g.(32 580526_32584248)_( 32597007_32598379) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	32,580,526	32,584,248	32,597,007	32,598,379
nssv1576380	Remapped	Perfect	NC_000006.12:g.(32 580526_32584248)_( 32597007_32598379) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	32,580,526	32,584,248	32,597,007	32,598,379
nssv1573362	Remapped	Perfect	NC_000006.11:g.(32 548303_32552025)_( 32564784_32566156) dup	GRCh37.p13	First Pass	NC_000006.11	Chr6	32,548,303	32,552,025	32,564,784	32,566,156
nssv1576380	Remapped	Perfect	NC_000006.11:g.(32 548303_32552025)_( 32564784_32566156) dup	GRCh37.p13	First Pass	NC_000006.11	Chr6	32,548,303	32,552,025	32,564,784	32,566,156
nssv1573362	Submitted genomic		NC_000006.10:g.(32 656281_32660003)_( 32672762_32674134) dup	NCBI36 (hg18)		NC_000006.10	Chr6	32,656,281	32,660,003	32,672,762	32,674,134
nssv1576380	Submitted genomic		NC_000006.10:g.(32 656281_32660003)_( 32672762_32674134) dup	NCBI36 (hg18)		NC_000006.10	Chr6	32,656,281	32,660,003	32,672,762	32,674,134

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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