nsv888413
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:497,599
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2416 SVs from 114 studies. See in: genome view
Overlapping variant regions from other studies: 2413 SVs from 115 studies. See in: genome view
Overlapping variant regions from other studies: 827 SVs from 34 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv888413 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 76,488,434 | 76,507,072 | 76,978,686 | 76,986,032 |
| nsv888413 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 76,117,751 | 76,136,389 | 76,608,003 | 76,615,349 |
| nsv888413 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 75,955,687 | 75,974,325 | 76,445,939 | 76,453,285 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1532709 | copy number gain | MS10807 | SNP array | SNP genotyping analysis | 7 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1532709 | Remapped | Perfect | NC_000007.14:g.(76 488434_76507072)_( 76978686_76986032) dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 76,488,434 | 76,507,072 | 76,978,686 | 76,986,032 |
| nssv1532709 | Remapped | Perfect | NC_000007.13:g.(76 117751_76136389)_( 76608003_76615349) dup | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 76,117,751 | 76,136,389 | 76,608,003 | 76,615,349 |
| nssv1532709 | Submitted genomic | NC_000007.12:g.(75 955687_75974325)_( 76445939_76453285) dup | NCBI36 (hg18) | NC_000007.12 | Chr7 | 75,955,687 | 75,974,325 | 76,445,939 | 76,453,285 |