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nsv890760

  • Variant Calls:7
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:197,438

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 2123 SVs from 91 studies. See in: genome view    
Remapped(Score: Perfect):39,374,115-39,571,552Question Mark
Overlapping variant regions from other studies: 2123 SVs from 91 studies. See in: genome view    
Remapped(Score: Perfect):39,231,634-39,429,071Question Mark
Overlapping variant regions from other studies: 1194 SVs from 33 studies. See in: genome view    
Submitted genomic39,350,791-39,548,228Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv890760RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000008.11Chr839,374,11539,380,14939,567,50939,571,552
nsv890760RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000008.10Chr839,231,63439,237,66839,425,02839,429,071
nsv890760Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000008.9Chr839,350,79139,356,82539,544,18539,548,228

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1565807copy number lossIS30522SNP arraySNP genotyping analysis84
nssv1568144copy number lossIS31205SNP arraySNP genotyping analysis98
nssv1568686copy number lossIS31330SNP arraySNP genotyping analysis66
nssv1569725copy number lossIS31679SNP arraySNP genotyping analysis32
nssv1574537copy number gainIS33592SNP arraySNP genotyping analysis11
nssv1588044copy number lossIS38148SNP arraySNP genotyping analysis24
nssv1600779copy number lossIS41924SNP arraySNP genotyping analysis36

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1565807RemappedPerfectNC_000008.11:g.(39
374115_39380149)_(
39567509_39571552)
del		GRCh38.p12First PassNC_000008.11Chr839,374,11539,380,14939,567,50939,571,552
nssv1568144RemappedPerfectNC_000008.11:g.(39
374115_39380149)_(
39567509_39571552)
del		GRCh38.p12First PassNC_000008.11Chr839,374,11539,380,14939,567,50939,571,552
nssv1568686RemappedPerfectNC_000008.11:g.(39
374115_39380149)_(
39567509_39571552)
del		GRCh38.p12First PassNC_000008.11Chr839,374,11539,380,14939,567,50939,571,552
nssv1569725RemappedPerfectNC_000008.11:g.(39
374115_39380149)_(
39567509_39571552)
del		GRCh38.p12First PassNC_000008.11Chr839,374,11539,380,14939,567,50939,571,552
nssv1574537RemappedPerfectNC_000008.11:g.(39
374115_39380149)_(
39567509_39571552)
dup		GRCh38.p12First PassNC_000008.11Chr839,374,11539,380,14939,567,50939,571,552
nssv1588044RemappedPerfectNC_000008.11:g.(39
374115_39380149)_(
39567509_39571552)
del		GRCh38.p12First PassNC_000008.11Chr839,374,11539,380,14939,567,50939,571,552
nssv1600779RemappedPerfectNC_000008.11:g.(39
374115_39380149)_(
39567509_39571552)
del		GRCh38.p12First PassNC_000008.11Chr839,374,11539,380,14939,567,50939,571,552
nssv1565807RemappedPerfectNC_000008.10:g.(39
231634_39237668)_(
39425028_39429071)
del		GRCh37.p13First PassNC_000008.10Chr839,231,63439,237,66839,425,02839,429,071
nssv1568144RemappedPerfectNC_000008.10:g.(39
231634_39237668)_(
39425028_39429071)
del		GRCh37.p13First PassNC_000008.10Chr839,231,63439,237,66839,425,02839,429,071
nssv1568686RemappedPerfectNC_000008.10:g.(39
231634_39237668)_(
39425028_39429071)
del		GRCh37.p13First PassNC_000008.10Chr839,231,63439,237,66839,425,02839,429,071
nssv1569725RemappedPerfectNC_000008.10:g.(39
231634_39237668)_(
39425028_39429071)
del		GRCh37.p13First PassNC_000008.10Chr839,231,63439,237,66839,425,02839,429,071
nssv1574537RemappedPerfectNC_000008.10:g.(39
231634_39237668)_(
39425028_39429071)
dup		GRCh37.p13First PassNC_000008.10Chr839,231,63439,237,66839,425,02839,429,071
nssv1588044RemappedPerfectNC_000008.10:g.(39
231634_39237668)_(
39425028_39429071)
del		GRCh37.p13First PassNC_000008.10Chr839,231,63439,237,66839,425,02839,429,071
nssv1600779RemappedPerfectNC_000008.10:g.(39
231634_39237668)_(
39425028_39429071)
del		GRCh37.p13First PassNC_000008.10Chr839,231,63439,237,66839,425,02839,429,071
nssv1565807Submitted genomicNC_000008.9:g.(393
50791_39356825)_(3
9544185_39548228)d
el		NCBI36 (hg18)NC_000008.9Chr839,350,79139,356,82539,544,18539,548,228
nssv1568144Submitted genomicNC_000008.9:g.(393
50791_39356825)_(3
9544185_39548228)d
el		NCBI36 (hg18)NC_000008.9Chr839,350,79139,356,82539,544,18539,548,228
nssv1568686Submitted genomicNC_000008.9:g.(393
50791_39356825)_(3
9544185_39548228)d
el		NCBI36 (hg18)NC_000008.9Chr839,350,79139,356,82539,544,18539,548,228
nssv1569725Submitted genomicNC_000008.9:g.(393
50791_39356825)_(3
9544185_39548228)d
el		NCBI36 (hg18)NC_000008.9Chr839,350,79139,356,82539,544,18539,548,228
nssv1574537Submitted genomicNC_000008.9:g.(393
50791_39356825)_(3
9544185_39548228)d
up		NCBI36 (hg18)NC_000008.9Chr839,350,79139,356,82539,544,18539,548,228
nssv1588044Submitted genomicNC_000008.9:g.(393
50791_39356825)_(3
9544185_39548228)d
el		NCBI36 (hg18)NC_000008.9Chr839,350,79139,356,82539,544,18539,548,228
nssv1600779Submitted genomicNC_000008.9:g.(393
50791_39356825)_(3
9544185_39548228)d
el		NCBI36 (hg18)NC_000008.9Chr839,350,79139,356,82539,544,18539,548,228

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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