nsv891308

Organism: Homo sapiens

Study:nstd71 (Xu et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:12
Validation:Not tested
Clinical Assertions: No
Region Size:91,812

Publication(s):Xu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 536 SVs from 51 studies. See in: genome view

Remapped(Score: Perfect):111,059,761-111,151,572

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv891308	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nsv891308	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nsv891308	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1532156	copy number loss	MS10727	SNP array	SNP genotyping analysis	29
nssv1537301	copy number loss	MS13154	SNP array	SNP genotyping analysis	35
nssv1538415	copy number loss	MS13727	SNP array	SNP genotyping analysis	76
nssv1558481	copy number loss	MS23290	SNP array	SNP genotyping analysis	41
nssv1566171	copy number loss	IS30597	SNP array	SNP genotyping analysis	66
nssv1566344	copy number loss	IS30667	SNP array	SNP genotyping analysis	35
nssv1570088	copy number gain	IS31799	SNP array	SNP genotyping analysis	23
nssv1571245	copy number gain	IS32653	SNP array	SNP genotyping analysis	20
nssv1578274	copy number gain	IS34748	SNP array	SNP genotyping analysis	22
nssv1579922	copy number loss	IS35189	SNP array	SNP genotyping analysis	30
nssv1589252	copy number gain	IS38330	SNP array	SNP genotyping analysis	35
nssv1600636	copy number gain	IS41906	SNP array	SNP genotyping analysis	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1532156	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1537301	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1538415	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1558481	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1566171	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1566344	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1570088	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1571245	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1578274	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1579922	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1589252	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1600636	Remapped	Perfect	NC_000008.11:g.(11 1059761_111066604) _(111145311_111151 572)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	111,059,761	111,066,604	111,145,311	111,151,572
nssv1532156	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1537301	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1538415	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1558481	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1566171	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1566344	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1570088	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1571245	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1578274	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1579922	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1589252	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1600636	Remapped	Perfect	NC_000008.10:g.(11 2071990_112078833) _(112157540_112163 801)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	112,071,990	112,078,833	112,157,540	112,163,801
nssv1532156	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)del	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1537301	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)del	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1538415	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)del	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1558481	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)del	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1566171	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)del	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1566344	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)del	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1570088	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)dup	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1571245	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)dup	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1578274	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)dup	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1579922	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)del	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1589252	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)dup	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977
nssv1600636	Submitted genomic		NC_000008.9:g.(112 141166_112148009)_ (112226716_1122329 77)dup	NCBI36 (hg18)		NC_000008.9	Chr8	112,141,166	112,148,009	112,226,716	112,232,977

dbVar

Database of genomic structural variation

nsv891308

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant