nsv891453
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:730,813
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1662 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 1662 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 442 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv891453 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 131,680,548 | 131,687,207 | 132,404,309 | 132,411,360 |
| nsv891453 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 132,692,795 | 132,699,454 | 133,416,556 | 133,423,607 |
| nsv891453 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 132,761,977 | 132,768,636 | 133,485,738 | 133,492,789 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1547410 | copy number gain | MS17371 | SNP array | SNP genotyping analysis | 12 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1547410 | Remapped | Perfect | NC_000008.11:g.(13 1680548_131687207) _(132404309_132411 360)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 131,680,548 | 131,687,207 | 132,404,309 | 132,411,360 |
| nssv1547410 | Remapped | Perfect | NC_000008.10:g.(13 2692795_132699454) _(133416556_133423 607)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 132,692,795 | 132,699,454 | 133,416,556 | 133,423,607 |
| nssv1547410 | Submitted genomic | NC_000008.9:g.(132 761977_132768636)_ (133485738_1334927 89)dup | NCBI36 (hg18) | NC_000008.9 | Chr8 | 132,761,977 | 132,768,636 | 133,485,738 | 133,492,789 |