nsv892184
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:79,219
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 696 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 700 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 324 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv892184 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 6,906,384 | 6,910,916 | 6,984,781 | 6,985,602 |
| nsv892184 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 6,906,384 | 6,910,916 | 6,984,781 | 6,985,602 |
| nsv892184 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 6,896,384 | 6,900,916 | 6,974,781 | 6,975,602 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1545231 | copy number gain | MS16708 | SNP array | SNP genotyping analysis | 118 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1545231 | Remapped | Perfect | NC_000009.12:g.(69 06384_6910916)_(69 84781_6985602)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 6,906,384 | 6,910,916 | 6,984,781 | 6,985,602 |
| nssv1545231 | Remapped | Perfect | NC_000009.11:g.(69 06384_6910916)_(69 84781_6985602)dup | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 6,906,384 | 6,910,916 | 6,984,781 | 6,985,602 |
| nssv1545231 | Submitted genomic | NC_000009.10:g.(68 96384_6900916)_(69 74781_6975602)dup | NCBI36 (hg18) | NC_000009.10 | Chr9 | 6,896,384 | 6,900,916 | 6,974,781 | 6,975,602 |