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dbVar

Database of genomic structural variation

nsv892676

Organism: Homo sapiens

Study:nstd71 (Xu et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:75,943

Publication(s):Xu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 644 SVs from 70 studies. See in: genome view

Remapped(Score: Perfect):17,911,468-17,987,410

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv892676	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	17,911,468	17,918,808	17,985,168	17,987,410
nsv892676	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	17,911,466	17,918,806	17,985,166	17,987,408
nsv892676	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000009.10	Chr9	17,901,466	17,908,806	17,975,166	17,977,408

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1545268	copy number gain	MS16708	SNP array	SNP genotyping analysis	118
nssv1586924	copy number gain	IS37986	SNP array	SNP genotyping analysis	299

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1545268	Remapped	Perfect	NC_000009.12:g.(17 911468_17918808)_( 17985168_17987410) dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	17,911,468	17,918,808	17,985,168	17,987,410
nssv1586924	Remapped	Perfect	NC_000009.12:g.(17 911468_17918808)_( 17985168_17987410) dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	17,911,468	17,918,808	17,985,168	17,987,410
nssv1545268	Remapped	Perfect	NC_000009.11:g.(17 911466_17918806)_( 17985166_17987408) dup	GRCh37.p13	First Pass	NC_000009.11	Chr9	17,911,466	17,918,806	17,985,166	17,987,408
nssv1586924	Remapped	Perfect	NC_000009.11:g.(17 911466_17918806)_( 17985166_17987408) dup	GRCh37.p13	First Pass	NC_000009.11	Chr9	17,911,466	17,918,806	17,985,166	17,987,408
nssv1545268	Submitted genomic		NC_000009.10:g.(17 901466_17908806)_( 17975166_17977408) dup	NCBI36 (hg18)		NC_000009.10	Chr9	17,901,466	17,908,806	17,975,166	17,977,408
nssv1586924	Submitted genomic		NC_000009.10:g.(17 901466_17908806)_( 17975166_17977408) dup	NCBI36 (hg18)		NC_000009.10	Chr9	17,901,466	17,908,806	17,975,166	17,977,408

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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