nsv895324
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:548,943
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2838 SVs from 97 studies. See in: genome view
Overlapping variant regions from other studies: 1595 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 1342 SVs from 32 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv895324 | Remapped | Pass | GRCh38.p12 | Primary Assembly | Second Pass | NC_000010.11 | Chr10 | - | 47,438,558 | 47,987,500 | - |
| nsv895324 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | - | 47,689,666 | 47,934,082 | 47,934,082 |
| nsv895324 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 47,106,350 | 47,110,350 | 47,218,918 | 47,454,088 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1594741 | copy number gain | IS40005 | SNP array | SNP genotyping analysis | 8 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1594741 | Remapped | Pass | NC_000010.11:g.(?_ 47438558)_(4798750 0_?)dup | GRCh38.p12 | Second Pass | NC_000010.11 | Chr10 | - | 47,438,558 | 47,987,500 | - |
| nssv1594741 | Remapped | Pass | NC_000010.10:g.(?_ 47689666)_(4793408 2_47934082)dup | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | - | 47,689,666 | 47,934,082 | 47,934,082 |
| nssv1594741 | Submitted genomic | NC_000010.9:g.(471 06350_47110350)_(4 7218918_47454088)d up | NCBI36 (hg18) | NC_000010.9 | Chr10 | 47,106,350 | 47,110,350 | 47,218,918 | 47,454,088 |