U.S. flag

An official website of the United States government

nsv898873

  • Variant Calls:29
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:7,757

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 325 SVs from 59 studies. See in: genome view    
Remapped(Score: Perfect):20,855,070-20,862,826Question Mark
Overlapping variant regions from other studies: 325 SVs from 59 studies. See in: genome view    
Remapped(Score: Perfect):21,008,004-21,015,760Question Mark
Overlapping variant regions from other studies: 120 SVs from 20 studies. See in: genome view    
Submitted genomic20,899,271-20,907,027Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv898873RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nsv898873RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nsv898873Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1522253copy number lossSP52863SNP arraySNP genotyping analysis14
nssv1533791copy number lossMS11306SNP arraySNP genotyping analysis116
nssv1542308copy number lossMS15749SNP arraySNP genotyping analysis46
nssv1550896copy number lossMS18648SNP arraySNP genotyping analysis25
nssv1558998copy number lossMS23670SNP arraySNP genotyping analysis55
nssv1566116copy number lossIS30593SNP arraySNP genotyping analysis31
nssv1566651copy number lossIS30835SNP arraySNP genotyping analysis28
nssv1567397copy number lossIS31074SNP arraySNP genotyping analysis39
nssv1568067copy number lossIS31194SNP arraySNP genotyping analysis18
nssv1569474copy number lossIS31581SNP arraySNP genotyping analysis63
nssv1570136copy number lossIS31812SNP arraySNP genotyping analysis21
nssv1570245copy number lossIS31837SNP arraySNP genotyping analysis34
nssv1570457copy number lossIS32015SNP arraySNP genotyping analysis16
nssv1571246copy number gainIS32653SNP arraySNP genotyping analysis20
nssv1572569copy number gainIS33140SNP arraySNP genotyping analysis5
nssv1573648copy number lossIS33475SNP arraySNP genotyping analysis42
nssv1574074copy number lossIS33507SNP arraySNP genotyping analysis41
nssv1574741copy number lossIS33616SNP arraySNP genotyping analysis58
nssv1577310copy number lossIS34407SNP arraySNP genotyping analysis69
nssv1578033copy number lossIS34645SNP arraySNP genotyping analysis32
nssv1578278copy number gainIS34748SNP arraySNP genotyping analysis22
nssv1578685copy number lossIS34856SNP arraySNP genotyping analysis41
nssv1579923copy number lossIS35189SNP arraySNP genotyping analysis30
nssv1582368copy number lossIS35911SNP arraySNP genotyping analysis89
nssv1584753copy number gainIS37167SNP arraySNP genotyping analysis8
nssv1591998copy number lossIS39119SNP arraySNP genotyping analysis39
nssv1595935copy number lossIS40368SNP arraySNP genotyping analysis50
nssv1597060copy number gainIS40728SNP arraySNP genotyping analysis17
nssv1597440copy number lossIS40819SNP arraySNP genotyping analysis36

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1522253RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1533791RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1542308RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1550896RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1558998RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1566116RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1566651RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1567397RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1568067RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1569474RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1570136RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1570245RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1570457RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1571246RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
dup
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1572569RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
dup
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1573648RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1574074RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1574741RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1577310RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1578033RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1578278RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
dup
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1578685RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1579923RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1582368RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1584753RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
dup
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1591998RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1595935RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1597060RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
dup
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1597440RemappedPerfectNC_000012.12:g.(20
855070_20857114)_(
20861335_20862826)
del
GRCh38.p12First PassNC_000012.12Chr1220,855,07020,857,11420,861,33520,862,826
nssv1522253RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1533791RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1542308RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1550896RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1558998RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1566116RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1566651RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1567397RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1568067RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1569474RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1570136RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1570245RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1570457RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1571246RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
dup
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1572569RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
dup
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1573648RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1574074RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1574741RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1577310RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1578033RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1578278RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
dup
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1578685RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1579923RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1582368RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1584753RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
dup
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1591998RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1595935RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1597060RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
dup
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1597440RemappedPerfectNC_000012.11:g.(21
008004_21010048)_(
21014269_21015760)
del
GRCh37.p13First PassNC_000012.11Chr1221,008,00421,010,04821,014,26921,015,760
nssv1522253Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1533791Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1542308Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1550896Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1558998Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1566116Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1566651Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1567397Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1568067Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1569474Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1570136Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1570245Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1570457Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1571246Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
dup
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1572569Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
dup
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1573648Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1574074Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1574741Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1577310Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1578033Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1578278Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
dup
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1578685Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1579923Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1582368Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1584753Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
dup
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1591998Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1595935Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1597060Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
dup
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027
nssv1597440Submitted genomicNC_000012.10:g.(20
899271_20901315)_(
20905536_20907027)
del
NCBI36 (hg18)NC_000012.10Chr1220,899,27120,901,31520,905,53620,907,027

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

Support Center