nsv901351
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:15
- Validation:Not tested
- Clinical Assertions: No
- Region Size:205,927
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2753 SVs from 106 studies. See in: genome view
Overlapping variant regions from other studies: 2936 SVs from 106 studies. See in: genome view
Overlapping variant regions from other studies: 1422 SVs from 33 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv901351 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nsv901351 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nsv901351 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1499709 | copy number gain | SP50125 | SNP array | SNP genotyping analysis | 18 |
| nssv1521184 | copy number gain | SP52264 | SNP array | SNP genotyping analysis | 10 |
| nssv1525585 | copy number gain | SP56724 | SNP array | SNP genotyping analysis | 8 |
| nssv1535345 | copy number gain | MS12157 | SNP array | SNP genotyping analysis | 13 |
| nssv1537682 | copy number gain | MS13292 | SNP array | SNP genotyping analysis | 31 |
| nssv1541896 | copy number gain | MS15528 | SNP array | SNP genotyping analysis | 7 |
| nssv1548488 | copy number gain | MS17869 | SNP array | SNP genotyping analysis | 15 |
| nssv1551114 | copy number gain | MS18784 | SNP array | SNP genotyping analysis | 11 |
| nssv1551946 | copy number gain | MS19023 | SNP array | SNP genotyping analysis | 14 |
| nssv1557136 | copy number gain | MS22421 | SNP array | SNP genotyping analysis | 17 |
| nssv1559398 | copy number gain | MS23949 | SNP array | SNP genotyping analysis | 13 |
| nssv1559752 | copy number gain | MS24108 | SNP array | SNP genotyping analysis | 17 |
| nssv1564563 | copy number gain | IS30238 | SNP array | SNP genotyping analysis | 16 |
| nssv1571710 | copy number gain | IS32787 | SNP array | SNP genotyping analysis | 10 |
| nssv1578159 | copy number gain | IS34698 | SNP array | SNP genotyping analysis | 14 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1499709 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1521184 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1525585 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1535345 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1537682 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1541896 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1548488 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1551114 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1551946 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1557136 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1559398 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1559752 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1564563 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1571710 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1578159 | Remapped | Perfect | NC_000014.9:g.(197 50966_19755844)_(1 9955706_19956892)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,750,966 | 19,755,844 | 19,955,706 | 19,956,892 |
| nssv1499709 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1521184 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1525585 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1535345 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1537682 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1541896 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1548488 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1551114 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1551946 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1557136 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1559398 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1559752 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1564563 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1571710 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1578159 | Remapped | Perfect | NC_000014.8:g.(202 19125_20224003)_(2 0423865_20425051)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,219,125 | 20,224,003 | 20,423,865 | 20,425,051 |
| nssv1499709 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1521184 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1525585 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1535345 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1537682 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1541896 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1548488 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1551114 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1551946 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1557136 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1559398 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1559752 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1564563 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1571710 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 | ||
| nssv1578159 | Submitted genomic | NC_000014.7:g.(192 88965_19293843)_(1 9493705_19494891)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,288,965 | 19,293,843 | 19,493,705 | 19,494,891 |